Publications

{P, KiranRaj ey, Anup Subedee, Bishesh Khanal, Bhagawan Koirala
COVID-19 control strategies and intervention effects in resource limited settings: a modeling study
medRxiv, 2020
PDF Bibtex

@article {Pandey2020.04.26.20079673,
	author = {Pandey, Kiran Raj and Subedee, Anup and Khanal, Bishesh and Koirala, Bhagawan},
	title = {COVID-19 Control Strategies and Intervention Effects in Resource Limited Settings: A Modeling Study},
	elocation-id = {2020.04.26.20079673},
	year = {2020},
	doi = {10.1101/2020.04.26.20079673},
	publisher = {Cold Spring Harbor Laboratory Press},
	URL = {https://www.medrxiv.org/content/early/2020/05/06/2020.04.26.20079673},
	eprint = {https://www.medrxiv.org/content/early/2020/05/06/2020.04.26.20079673.full.pdf},
	journal = {medRxiv}
}

Md.Kamrul {Hasan, Md.Ashraful Alam, Lavsen Dahal, Md.ToufickE Elahi, Shidhartho Roy, SifatRedwan Wahid, Robert Mart{\'\i}, Bishesh Khanal
Challenges of Deep Learning Methods for COVID-19 Detection Using Public Datasets
2020
PDF Bibtex

@article {Hasan2020.11.07.20227504,
	author = {Hasan, Md. Kamrul and Alam, Md. Ashraful and Dahal, Lavsen and Elahi, Md. Toufick E and Roy, Shidhartho and Wahid, Sifat Redwan and Mart{\'\i}, Robert and Khanal, Bishesh},
	title = {Challenges of Deep Learning Methods for COVID-19 Detection Using Public Datasets},
	elocation-id = {2020.11.07.20227504},
	year = {2020},
	doi = {10.1101/2020.11.07.20227504},
	publisher = {Cold Spring Harbor Laboratory Press},
	
}

Lavsen Dahal, AayushKafle, BisheshKhanal
Uncertainty Estimation in Deep 2D Echocardiography Segmentation
2020
PDF Bibtex

@misc{dahal2020uncertainty,
      title={Uncertainty Estimation in Deep 2D Echocardiography Segmentation}, 
      author={Lavsen Dahal and Aayush Kafle and Bishesh Khanal},
      year={2020},
      eprint={2005.09349},
      archivePrefix={arXiv},
      primaryClass={cs.CV}
}

Bishesh Khanal, J.Matthew, Y.Li, B.Khanal, J.J.{CerrolazaMartinez}, N.Toussaint, C.Gupta, C.Knight, B.Kainz, J.V.Hajnal, M.Rutherford
Towards automated extraction of 2D standard fetal head planes from 3D ultrasound acquisitions: A clinical evaluation and quality assessment comparison
Radiography (Journal), 2021
Bibtex

@article{SKELTON2021519,
title = {Towards automated extraction of 2D standard fetal head planes from 3D ultrasound acquisitions: A clinical evaluation and quality assessment comparison},
journal = {Radiography},
volume = {27},
number = {2},
pages = {519-526},
year = {2021},
issn = {1078-8174},
doi = {https://doi.org/10.1016/j.radi.2020.11.006},
url = {https://www.sciencedirect.com/science/article/pii/S1078817420302352},
author = {E. Skelton and J. Matthew and Y. Li and B. Khanal and J.J. {Cerrolaza Martinez} and N. Toussaint and C. Gupta and C. Knight and B. Kainz and J.V. Hajnal and M. Rutherford},
keywords = {Clinical evaluation, Fetal imaging, Quality assessment, Ultrasound},
}

Bidur Khanal, Lavsen Dahal, Prashant Adhikari, Bishesh Khanal
Automatic Cobb Angle Detection using Vertebra Detector and Vertebra Corners Regression
Medical Imaging, Computer Vision, Machine Learning, Artificial IntelligenceComputational Methods and Clinical Applications for Spine Imaging. MICCAI 2019 CSI Workshop & Challenge, Shenzen, China , 2019
PDF Bibtex

@article{khanal2019automatic,
  title={Automatic Cobb Angle Detection using Vertebra Detector and Vertebra Corners Regression},
  author={Khanal, Bidur and Dahal, Lavsen and Adhikari, Prashant and Khanal, Bishesh},
  url={arXiv preprint arXiv:1910.14202},
  year={2019},
  maintitle = {Medical Image Computing and Computer Assisted Intervention (MICCAI) 2019},
  booktitle = {Computational Methods and Clinical Applications for Spine Imaging. CSI Workshop and Challenge}
}

Alberto Gomez, VeronikaA Zimmer, Bishesh Khanal, Nicolas Toussaint, JuliaA Schnabel
Adapted and Oversegmenting Graphs: Application to Geometric Deep Learning
Computer Vision, Deep Learning, Artificial IntelligenceUnder Review, 2019
PDF Bibtex

@article{gomez2018oversegmenting,
  title={Oversegmenting Graphs},
  author={Gomez, Alberto and Zimmer, Veronika A and Khanal, Bishesh and Toussaint, Nicolas and Schnabel, Julia A},
  journal={arXiv preprint arXiv:1806.00411},
  year={2018},
 note={under review}
}

Alberto Gomez, Veronika Zimmer, Nicolas Toussaint, Robert Wright, JamesR. Clough, Bishesh Khanal, MilouVan Poppel, Emily Skelton, Jackie Matthews, JuliaA. Schnabel
Image Reconstruction in a Manifold of Image Patches: Application to Whole-fetus Ultrasound Imaging
MLMIR workshop in MICCAI (accepted), 2019
Bibtex

                  @inproceedings{gomez2019image,
                    title={Image Reconstruction in a Manifold of Image Patches: Application to Whole-fetus Ultrasound Imaging},
                    author={Gomez, Alberto and Zimmer, Veronika and Toussaint, Nicolas and Wright, Robert and Clough, James R. and Khanal, Bishesh and Poppel, Milou Van and Skelton, Emily and Matthews, Jackie and Schnabel, Julia A.},
                    booktitle={MLMIR in MICCAI},
                    year={2019},
		    note={Accepted},                    
                  }

Samuel Budd, Matthew Sinclair, Bishesh Khanal, Jacqueline Matthew, David Llyod, Alberto Gomez, Nicolas Toussaint, Emma Robinson, Bernhard Kainz
Confident Head Circumference Measurement from Ultrasound with Real-time Feedback for Sonographers
MICCAI 2019 (Accepted, 31% acceptance rate), 2019
PDF Bibtex

@inproceedings{budd2019confident,
  title={Confident Head Circumference Measurement from Ultrasound with Real-time Feedback for Sonographers},
  author={Budd, Samuel and Sinclair, Matthew and Khanal, Bishesh and  Matthew, Jacqueline and Llyod, David and Gomez, Alberto and Toussaint, Nicolas and Robinson, Emma and Kainz, Bernhard},
  booktitle={MICCAI},
  year={2019},
  note={Accepted}
}

Veronika Zimmer, Alberto Gomez, Emily Skelton, Nicolas Toussaint, Tong Zhang, Bishesh Khanal, Robert Wright, Yohan Noh, Alison Ho, Jacqueline Matthew, Julia Schnabel
Towards whole placenta segmentation at late gestation using multi-view ultrasound images
MICCAI 2019 (Accepted, 31% acceptance rate), 2019
Bibtex

@inproceedings{zimmer2019towards,
  title={Towards whole placenta segmentation at late gestation using multi-view ultrasound images},
  author={Zimmer, Veronika and Gomez, Alberto and Skelton, Emily and Toussaint, Nicolas and Zhang, Tong and Khanal, Bishesh and Wright, Robert and Noh, Yohan and Ho, Alison and Matthew, Jacqueline and Schnabel, Julia},
  booktitle={MICCAI},
  year={2019},
  note={Accepted}
}

Robert Wright, Nicolas Toussaint, Alberto Gomez, Veronika Zimmer, Jacqueline Matthew, Emily Skelton, Bishesh Khanal, Bernhard Kainz, Daniel Reuckert, Jo Hajnal, Julia Schnabel
Complete Fetal Head Compounding from Multi-View 3D Ultrasound
MICCAI 2019 (Accepted, 31% acceptance rate), 2019
Bibtex

@inproceedings{wright2019complete,
  title={Complete Fetal Head Compounding from Multi-View 3D Ultrasound},
  author={Wright, Robert and Toussaint, Nicolas and Gomez, Alberto and Zimmer, Veronika and Matthew, Jacqueline and Skelton, Emily and Khanal, Bishesh and Kainz, Bernhard and Reuckert, Daniel and Hajnal, Jo and Schnabel, Julia},
  booktitle={MICCAI},
  year={2019},
  note={Accepted},
}